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1

Incremental Network Optimization: Theory and Algorithms

Şeref, Onur, Ahuja, Ravindra K., Orlin, James B.

Journal:

Operations Research

Year:

2009

Language:

english

File:

PDF, 224 KB

english, 2009

2

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Monkey search: a novel metaheuristic search for global optimization

Mucherino, Antonio, Seref, Onur, Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 2.29 MB

english, 2007

3

Weighted relaxed support vector machines

Şeref, Onur, Razzaghi, Talayeh, Xanthopoulos, Petros

Journal:

Annals of Operations Research

Year:

2017

Language:

english

File:

PDF, 845 KB

english, 2017

4

Incremental Network Optimization: Theory and Algorithms

Onur Şeref, Ravindra K. Ahuja and James B. Orlin

Journal:

Operations Research

Year:

2009

Language:

english

File:

PDF, 1.43 MB

english, 2009

5

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Quantitative analysis on electrooculography (EOG) for neurodegenerative disease

Liu, Chang-Chia, Chaovalitwongse, W. Art, Pardalos, Panos M., Seref, Onur, Xanthopoulos, Petros, Sackellares, J. C., Skidmore, Frank M., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 2.38 MB

english, 2007

6

Network Characteristics and Supply Chain Resilience under Conditions of Risk Propagation

Li, Yuhong, Zobel, Christopher W., Seref, Onur, Chatfield, Dean

Journal:

International Journal of Production Economics

Year:

2019

Language:

english

File:

PDF, 1019 KB

english, 2019

7

Multiple instance learning via margin maximization

O. Erhun Kundakcioglu, Onur Seref, Panos M. Pardalos

Journal:

Applied Numerical Mathematics

Year:

2010

Language:

english

File:

PDF, 216 KB

english, 2010

8

A new symbolic computation for formal integration with exact power series

Onur Kıymaz, Şeref Mirasyedioğlu

Journal:

Applied Mathematics and Computation

Year:

2005

Language:

english

File:

PDF, 208 KB

english, 2005

9

A new symbolic computational approach to singular initial value problems in the second-order ordinary differential equations

Onur Kıymaz, Şeref Mirasyedioğlu

Journal:

Applied Mathematics and Computation

Year:

2005

Language:

english

File:

PDF, 122 KB

english, 2005

10

Incremental Classification with Generalized Eigenvalues

Claudio Cifarelli, Mario R. Guarracino, Onur Seref, Salvatore Cuciniello, Panos M. Pardalos

Journal:

Journal of Classification

Year:

2007

Language:

english

File:

PDF, 587 KB

english, 2007

11

Special Issue on Combinatorial Optimization in Data Mining

Wanpracha Art Chaovalitwongse, Onur Seref

Journal:

Journal of Combinatorial Optimization

Year:

2008

Language:

english

File:

PDF, 110 KB

english, 2008

12

Selective support vector machines

Onur Seref, O. Erhun Kundakcioglu, Oleg A. Prokopyev, Panos M. Pardalos

Journal:

Journal of Combinatorial Optimization

Year:

2009

Language:

english

File:

PDF, 761 KB

english, 2009

13

Guest Editorial

Onur Şeref, Petros Xanthopoulos

Journal:

Journal of Combinatorial Optimization

Year:

2009

Language:

english

File:

PDF, 114 KB

english, 2009

14

Lithium-induced renal toxicity in rats: Protection by a novel antioxidant caffeic acid phenethyl ester

Faruk Oktem, Fehmi Ozguner, Osman Sulak, Şeref Olgar, Onur Akturk, H. Ramazan Yilmaz, Irfan Altuntas

Journal:

Molecular and Cellular Biochemistry

Year:

2005

Language:

english

File:

PDF, 147 KB

english, 2005

15

A new method for computing the solutions of differential equation systems using generalized inverse via Maple

Tolga Güyer, Onur Kıymaz, Göksal Bilgici, Şeref Mirasyedioğlu

Journal:

Applied Mathematics and Computation

Year:

2001

Language:

english

File:

PDF, 83 KB

english, 2001

16

An algorithmic approach to exact power series solutions of second order linear homogeneous differential equations with polynomial coefficients

Onur Kıymaz, Şeref Mirasyedioğlu

Journal:

Applied Mathematics and Computation

Year:

2003

Language:

english

File:

PDF, 125 KB

english, 2003

17

Recursive voids for identifying a nonconvex boundary of a set of points in the plane

Şeref, Onur, Zobel, Christopher W.

Journal:

Pattern Recognition

Year:

2013

Language:

english

File:

PDF, 3.15 MB

english, 2013

18

Information-theoretic feature selection with discrete $$k$$ k -median clustering

Şeref, Onur, Fan, Ya-Ju, Borenstein, Elan, Chaovalitwongse, Wanpracha A.

Journal:

Annals of Operations Research

Year:

2014

Language:

english

File:

PDF, 1.08 MB

english, 2014

19

Decomposition of Flux Distributions into Metabolic Pathways

Seref, Onur, Brooks, J.Paul, Fong, Stephen S.

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2013

Language:

english

File:

PDF, 647 KB

english, 2013

20

Mathematical Programming Formulations and Algorithms for Discrete k -Median Clustering of Time-Series Data

Seref, Onur, Fan, Ya-Ju, Chaovalitwongse, Wanpracha Art

Journal:

INFORMS Journal on Computing

Year:

2014

Language:

english

File:

PDF, 314 KB

english, 2014

21

Ultrasound-Guided Multiple Peripheral Nerve Blocks in a Superobese Patient

Kilicaslan, Alper, Topal, Ahmet, Erol, Atilla, Borazan, Hale, Bilge, Onur, Otelcioglu, Seref

Journal:

Case Reports in Anesthesiology

Year:

2014

Language:

english

File:

PDF, 1.93 MB

english, 2014

22

Constraint relaxation, cost-sensitive learning and bagging for imbalanced classification problems with outliers

Razzaghi, Talayeh, Xanthopoulos, Petros, Şeref, Onur

Journal:

Optimization Letters

Year:

2017

Language:

english

File:

PDF, 407 KB

english, 2017

23

The Prevalence of Barrett Esophagus Diagnosed in the Second Endoscopy

Suna, Nuretdin, Parlak, Erkan, Kuzu, Ufuk Baris, Yildiz, Hakan, Koksal, Aydin Seref, Oztas, Erkin, Sirtas, Zeliha, Yuksel, Mahmut, Aydinli, Onur, Bilge, Zulfikar, Taskiran, Ismail, Sasmaz, Nurgul

Journal:

Medicine (Medicine Publishing Company Ltd)

Year:

2016

Language:

english

File:

PDF, 177 KB

english, 2016

24

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - AntModeler analysis of mechanical stress driven transcription in three cell types

Lin, Nan, Chen, Andy, Mackley, Jennifer R., Winder, Steven J., Yokota, Hiroki, Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 748 KB

english, 2007

25

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Classification and disease prediction via mathematical programming

Lee, Eva K., Wu, Tsung-Lin, Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 4.96 MB

english, 2007

26

Enumeration and Cartesian Product Decomposition of Alternate Optimal Fluxes in Cellular Metabolism

Şeref, Onur, Brooks, J. Paul, Huang, Bernice, Fong, Stephen S.

Journal:

INFORMS Journal on Computing

Year:

2017

Language:

english

File:

PDF, 440 KB

english, 2017

27

Network Optimization of Functional Connectivity within Default Mode Network Regions to Detect Cognitive Decline

Chaovalitwongse, Wanpracha Art, Won, Daehan, Seref, Onur, Borghesani, Paul, Askren, Mary Katie, Willis, Sherry, Grabowski, Tom

Journal:

IEEE Transactions on Neural Systems and Rehabilitation Engineering

Year:

2017

Language:

english

File:

PDF, 961 KB

english, 2017

28

Advance selling to strategic consumers

Şeref, Michelle M. H., Şeref, Onur, Alptekinoğlu, Aydın, Erengüç, S. Selçuk

Journal:

Computational Management Science

Year:

2016

Language:

english

File:

PDF, 1018 KB

english, 2016

29

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Biclustering EEG data from epileptic patients treated with vagus nerve stimulation

Busygin, Stanislav, Boyko, Nikita, Pardalos, Panos M., Bewernitz, Michael, Ghacibeh, Georges, Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 1.33 MB

english, 2007

30

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - A continuous GRASP to determine the relationship between drugs and adverse reactions

Hirsch, Michael J., Meneses, Claudio N., Pardalos, Panos M., Ragle, Michelle, Resende, Mauricio G. C., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 2.04 MB

english, 2007

31

Relaxed support vector regression

Panagopoulos, Orestis P., Xanthopoulos, Petros, Razzaghi, Talayeh, Şeref, Onur

Journal:

Annals of Operations Research

Year:

2018

Language:

english

File:

PDF, 519 KB

english, 2018

32

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Numerical limitations in application of vector autoregressive modeling and Granger causality to analysis of EEG time series

Kammerdiner, Alla, Xanthopoulos, Petros, Pardalos, Panos M., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 2.36 MB

english, 2007

33

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Application of Bayesian networks and data mining to biomedical problems

Kammerdiner, Alla R., Gupal, Anatoliy M., Pardalos, Panos M., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 1.92 MB

english, 2007

34

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Quantification of the impact of vagus nerve stimulation parameters on electroencephalographic measures

Bewernitz, Michael, Ghacibeh, Georges, Seref, Onur, Pardalos, Panos M., Liu, Chang-Chia, Uthman, Basim, Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 2.05 MB

english, 2007

35

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Automated MR image processing and analysis of malignant brain tumors: enabling technology for data mining

Dube, Shishir, Corso, Jason J., Cloughesy, Timothy F., El-Saden, Suzie, Yuille, Alan L., Sinha, Usha, Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 3.57 MB

english, 2007

36

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Optimization of epilepsy treatment with vagus nerve stimulation

Uthman, Basim, Bewernitz, Michael, Liu, Chang-Chia, Ghacibeh, Georges, Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 2.45 MB

english, 2007

37

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - A web server for mining Comparative Genomic Hybridization (CGH) data

Liu, Jun, Ranka, Sanjay, Kahveci, Tamer, Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 4.96 MB

english, 2007

38

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Presence of nonlinearity in intracranial EEG recordings: detected by Lyapunov exponents

Liu, Chang-Chia, Shiau, Deng-Shan, Chaovalitwongse, W. Art, Pardalos, Panos M., Sackellares, J. C., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 2.67 MB

english, 2007

39

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Phase-rotated MR spectroscopy using dual-PRESS: theory and application in human brain

Ramadan, Saadallah, Thomas, M. Albert, Mountford, Carolyn E., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 1.47 MB

english, 2007

40

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Early seizure detection in an animal model of temporal lobe epilepsy

Talathi, Sachin S., Hwang, Dong-Uk, Ditto, William, Carney, Paul R., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

Language:

english

File:

PDF, 4.65 MB

english, 2007

41

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Phase-rotated MR spectroscopy using dual-PRESS: theory and application in human brain

Ramadan, Saadallah, Thomas, M. Albert, Mountford, Carolyn E., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

File:

PDF, 1.47 MB

2007

42

[AIP DATA MINING, SYSTEMS ANALYSIS AND OPTIMIZATION IN BIOMEDICINE - ()] AIP Conference Proceedings - Early seizure detection in an animal model of temporal lobe epilepsy

Talathi, Sachin S., Hwang, Dong-Uk, Ditto, William, Carney, Paul R., Seref, Onur, Kundakcioglu, O. Erhun, Pardalos, Panos

Year:

2007

File:

PDF, 4.65 MB

2007

43

Natural radioactivity, radon emanating power and mass exhalation rate of environmental soil samples from Karabük province, Turkey

Kurnaz, Aslı, Turhan, Şeref, Hançerlioğulları, Aybaba, Gören, Elif, Karataşlı, Muhammet, Altıkulaç, Aydan, Erer, Ahmet M., Metin, Onur

Journal:

Radiochimica Acta

Year:

2019

File:

PDF, 1.74 MB

2019

44

In silico identification of widely used and well-tolerated drugs as potential SARS-CoV-2 3C-like protease and viral RNA-dependent RNA polymerase inhibitors for direct use in clinical trials

Gul, Seref, Ozcan, Onur, Asar, Sinan, Okyar, Alper, BarÄ±s, Ibrahim, Kavakli, Ibrahim Halil

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2020

File:

PDF, 5.30 MB

2020

45

The Arg293 of Cryptochrome1 is responsible for the allosteric regulation of CLOCK-CRY1 binding in circadian rhythm

Gul, Seref, Aydin, Cihan, Ozcan, Onur, Gurkan, Berke, Surme, Saliha, Baris, Ibrahim, Kavakli, Ibrahim Halil

Journal:

Journal of Biological Chemistry

Year:

2020

File:

PDF, 13.70 MB

2020

46

Transcriptome analysis of the circadian clock gene BMAL1 deletion with opposite carcinogenic effects

Emisoglu-Kulahli, Handan, Gul, Seref, Morgil, Hande, Ozcan, Onur, Aygenli, Fatih, Selvi, Saba, Kavakli, Ibrahim Halil, Ozturk, Nuri

Journal:

Functional & Integrative Genomics

Year:

2020

File:

PDF, 979 KB

2020

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